PROJECT INFORMATION
GOLD Project ID
Gp0107306  
Project Name
Cylindrospermum alatosporum CCALA 988  
Other Names
  
Legacy ER Project ID
79110  
Legacy GOLD ID
Gi0079110  
NCBI BioProject Name Cylindrospermum alatosporum CCALA 988
NCBI BioProject ID 261005
NCBI BioProject Accession PRJNA261005
NCBI Locus Tag
  
NCBI BioSample Accession
PI
Added By JGI automated process on 2014-10-02
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance Evolution
Sequencing Center Biology Centre of the ASCR, v. v. i. (Czech Republic)
Collaborating Institute
  
Funding Agency
  
Project Description
The study is aimed at identification and bioinformatic characterization of non-ribosomal biosynthetic pathways for bioactive compounds, especially cytotoxic lipopeptides, produced by the strain. The results will likely provide new insights into the biosynthesis of cyanobacterial lipopeptides and enable development of environmental monitoring tools for toxic lipopeptides.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Cylindrospermum alatosporum CCALA 988 Genome sequencing
Organism Cylindrospermum alatosporum CCALA 988
Analysis Projects
  
Number of Analysis Projects (AP)
0  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0107306
Organism Name
Cylindrospermum alatosporum CCALA 988  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Cylindrospermum  
Genus Synonyms
  
Species
Cylindrospermum alatosporum  
Subspecies
  
Species Synonyms
  
Strain
CCALA 988  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1382618
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Nostocales  
NCBI Family
Nostocaceae  
NCBI Genus
Cylindrospermum  
NCBI Species
Cylindrospermum alatosporum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?