JGI GOLD | Project

PROJECT INFORMATION
GOLD Project ID	Gp0105998
Project Name	Aquifex pyrophilus GTC 01310
Other Names
Legacy ER Project ID	78345
Legacy GOLD ID	Gi0078345
NCBI BioProject Name	Whole genome sequencing of Aquifex pyrophilus, an opportunistic pathogen
NCBI BioProject Accession	PRJDB2656
NCBI Locus Tag
NCBI BioSample Accession
Source Sample ID
PI	Unknown
Added By	JGI automated process on 2014-09-22
Last Modified By
Project Comments
Project Status	incomplete
Project Relevance
Sequencing Center	National Institute of Genetics, Japan (Japan)
Collaborating Institute
Funding Agency
Project Description	Whole genome sequencing of Aquifex pyrophilus, an opportunistic pathogen
Is JGI Project	No
Project Information Visibility	Public
PROJECT TYPE
Specimen	Organism
Nucleic Acid	DNA
Sequencing Strategy	Whole Genome Sequencing
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
JGI Award DOI
Genome Publications
Other Publications
Ignored Publications
Unassigned Publications
SRA Experiment
PROJECT COMPOSITION
Study	Whole genome sequencing of opportunistic pathogens - National institute of Genetics, Japan.
Organism	Aquifex pyrophilus GTC 01310
Analysis Projects
Number of Analysis Projects (AP)	0
Number of Derived Analyis Projects (DAP)	0

SEQUENCING INFORMATION
Sequencing Status	In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
DNA Amplification Method
Single Cell Lysis Protocol
Single Cell Lysis Approach
Sequencing Comments
DNA Amplification Kit
Sequencing Technology (MIGS-29)
Library Method (MIGS-28)
Library Layout
Library Screening Method
Number Of Reads
Read Size
Vector
GC Percent
Chromosome Count
Plasmid Count

ORGANISM NAME
GOLD Organism ID	Go0105998
Organism Name	Aquifex pyrophilus GTC 01310
Other names (alias, synonyms, short names, common names)
Organism Domain	BACTERIAL
Phylogeny	AQUIFICOTA
Genus	Aquifex
Genus Synonyms
Species	Aquifex pyrophilus
Subspecies
Species Synonyms
Strain	GTC 01310
Strain Synonyms
Serovar/Cultivar
Culture Collection ID	GTC 01310
Type Strain	Unknown
Exemplar DOI
Exemplar Name
Taxon DOI
Biosafety Level
Organism Comments
Cultured	Yes
Culture Type	Isolate
Organism Type	Natural
Uncultured Type
Commercial Strain
Commercial Strain Comments
ORGANISM TAXONOMY
NCBI Taxonomy ID	2714
NCBI Superkingdom	Bacteria
NCBI Kingdom
NCBI Phylum	Aquificota
NCBI Class	Aquificae
NCBI Order	Aquificales
NCBI Family	Aquificaceae
NCBI Genus	Aquifex
NCBI Species	Aquifex pyrophilus
ISOLATION CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID

GENERAL PROPERTIES
Oxygen Requirement
Cell Shape
Motility
Sporulation
Temperature Range
Salinity
pH
Cell Diameter
Cell Length
Color
Gram Staining
Biotic Relationships
Symbiotic Physical Interaction
Symbiotic Relationship
Symbiont Name
Symbiont Taxon ID
Cell Arrangements
Diseases
Known Habitats
Metabolisms
Phenotypes
Energy Sources

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