PROJECT INFORMATION
GOLD Project ID
Gp0102899  
Project Name
Desulfallas thermosapovorans DSM 6562  
Other Names
  
Legacy ER Project ID
77270  
Legacy GOLD ID
Gi0077270  
NCBI BioProject Name Desulfotomaculum thermosapovorans DSM 6562
NCBI BioProject Accession PRJNA262207
NCBI Locus Tag
LX24  
NCBI BioSample Accession SAMN12255864
PI Nikos Kyrpides
Added By JGI automated process on 2014-08-14
Last Modified By JGI automated process on 2022-03-14
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA-KMG
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/10.25585/60000886
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX6767141  (Link to NCBI )
Experiment Title Desulfotomaculum thermosapovorans DSM 6562
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name YNWC
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Organism Desulfallas thermosapovorans DSM 6562
Analysis Projects Desulfallas thermosapovorans DSM 6562
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0102899
Organism Name
Desulfallas thermosapovorans DSM 6562  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfallas  
Genus Synonyms
  
Species
Desulfallas thermosapovorans  
Subspecies
  
Species Synonyms
  
Strain
DSM 6562  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 6562  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4351  
Exemplar Name
Desulfallas thermosapovorans  
Taxon DOI
10.1601/tx.32606  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121431
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Eubacteriales  
NCBI Family
Desulfallaceae  
NCBI Genus
Desulfallas  
NCBI Species
Desulfallas thermosapovorans  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Solid waste  
Ecosystem Type
Agricultural waste  
Ecosystem Subtype
Composting  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 160161
Genbank 16S ID Z26315
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Salinity
  
pH
7.2  
Cell Diameter
1.5-2.0 um  
Cell Length
5.0-8.0 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Compost
Metabolisms Sulfate reducer
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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