Studies
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56,334 |
|
Biosamples
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196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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GOLD Project ID
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Gp0102823
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Project Name
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Acetomicrobium thermoterrenum DSM 13490
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Other Names
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Anaerobaculum thermoterrenum DSM 13490
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Legacy ER Project ID
|
77194
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Legacy GOLD ID
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Gi0077194
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| NCBI BioProject Name | Anaerobaculum thermoterrenum DSM 13490 | ||||||||||||||||||
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NCBI BioProject Accession
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PRJNA262052 |
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NCBI Locus Tag
|
LV70
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||||||||||||||||||
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NCBI BioSample Accession
|
SAMN03080603 |
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Source Sample ID
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| PI | Nikos Kyrpides | ||||||||||||||||||
| Added By | JGI automated process on 2014-08-14 | ||||||||||||||||||
| Last Modified By | JGI automated process on 2023-06-01 | ||||||||||||||||||
| Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Tree of Life GEBA-KMG |
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Sequencing Center
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DOE Joint Genome Institute (JGI)
(USA)
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Collaborating Institute
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Funding Agency
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U.S. Department of Energy (DOE)
(USA)
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Project Description
|
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project
|
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| Is JGI Project |
Yes
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Project Information Visibility
|
Public | ||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||
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Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||
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JGI Data Utilization Status
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Unrestricted
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JGI Award DOI
|
10.46936/10.25585/60000886 |
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| JGI Portal Download | Raw Sequence Data | ||||||||||||||||||
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project |
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| Organism |
Acetomicrobium thermoterrenum DSM 13490 |
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| Analysis Projects |
Acetomicrobium thermoterrenum DSM 13490 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
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| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 1: Standard Draft |
|
Finishing Goal
|
Level 1: Standard Draft |
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Contamination Screening Input
|
|
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DNA Amplification Method
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Single Cell Lysis Protocol
|
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Single Cell Lysis Approach
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Sequencing Comments
|
|
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DNA Amplification Kit
|
|
|
Sequencing Technology
(MIGS-29)
|
|
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Library Method
(MIGS-28)
|
|
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Library Layout
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Library Screening Method
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Number Of Reads
|
|
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Read Size
|
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Vector
|
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| GC Percent |
44
|
| Chromosome Count |
|
| Plasmid Count |
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0102823 |
| Organism Name |
Acetomicrobium thermoterrenum DSM 13490
|
| Other names (alias, synonyms, short names, common names) |
Anaerobaculum thermoterrenum DSM 13490
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
SYNERGISTOTA
|
| Genus |
Acetomicrobium
|
| Genus Synonyms |
Anaerobaculum
|
| Species |
Acetomicrobium thermoterrenum
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
DSM 13490
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
DSM 13490
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4475
|
| Exemplar Name |
Acetomicrobium thermoterrenum
|
| Taxon DOI |
10.1601/tx.28320
|
| Biosafety Level |
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1120987 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Synergistota
|
| NCBI Class |
Synergistia
|
| NCBI Order |
Synergistales
|
| NCBI Family |
Acetomicrobiaceae
|
| NCBI Genus |
Acetomicrobium
|
| NCBI Species |
Acetomicrobium thermoterrenum
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
|
| Ecosystem Category |
|
| Ecosystem Type |
|
| Ecosystem Subtype |
|
| Specific Ecosystem |
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
163698 |
| Genbank 16S ID |
U50711 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Anaerobe
|
| Cell Shape |
Rod-shaped
|
| Motility |
Nonmotile
|
| Sporulation |
Nonsporulating
|
| Temperature Range |
Thermophile
|
| Salinity |
|
| pH |
5.5
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram-
|
| Biotic Relationships |
|
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
|
| Known Habitats |
Aquatic Oil fields |
| Metabolisms |
|
| Phenotypes |
Catalase negative |
| Energy Sources |
|
| CYANOBACTERIA METADATA | |
| Filaments |
|
| Filament Type |
|
| Differentiated Cells |
|
| Position Of Heterocysts |
|
| Cysts |
|
| Mode Of Reproduction |
|
| Trichome |
|
| Trichome Type |
|
| Carotenoids |
|
| Pigments |
|
| Phage Infectivity |
|
| Phage Type |
|
| Restriction Enzyme |
|
| Toxin Production |
|
| Toxin Type |
|
| Secondary Metabolites |
|
| Developmental Cycle |
|
| Branching |
|
| Gas Vesicles |
|
| Gas Vesicle Type |
|
| Diagnostic Inclusion Body Information |
|
| Extracellular Structures |
|
| Bloom Forming |
|
| Pigment Type |
|
| Complementary chromatic adaptation (CCA) |
|
| Medium Types |
|
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