PROJECT INFORMATION
GOLD Project ID
Gp0102137  
Project Name
Candidatus Protochlamydia massiliensis Diamant  
Other Names
  
Legacy ER Project ID
76910  
Legacy GOLD ID
Gi0076910  
NCBI BioProject Name Chlamydia sp. 'Diamant'
NCBI BioProject ID 253382
NCBI BioProject Accession PRJEB6590
NCBI Locus Tag
BN1093  
NCBI BioSample Accession SAMEA2609911
PI
Added By JGI automated process on 2014-08-08
Last Modified By Supratim Mukherjee on 2017-10-13
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Aix-Marseille University (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Protochlamydia naeglerophila was isolated by amoebal co-culture from a water sample.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Protochlamydia naeglerophila genome
Organism Candidatus Protochlamydia massiliensis Diamant
Analysis Projects Candidatus Protochlamydia massiliensis Diamant
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0102137
Organism Name
Candidatus Protochlamydia massiliensis Diamant  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
  
Genus Synonyms
  
Species
Candidatus Protochlamydia massiliensis Diamant  
Subspecies
  
Species Synonyms
  
Strain
Diamant  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1444711
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Parachlamydiales  
NCBI Family
Parachlamydiaceae  
NCBI Genus
Candidatus Protochlamydia  
NCBI Species
Candidatus Protochlamydia massiliensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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