PROJECT INFORMATION
GOLD Project ID
Gp0101940  
Project Name
Desulfobacula sp. TS  
Other Names
  
Legacy ER Project ID
76713  
Legacy GOLD ID
Gi0076713  
NCBI BioProject Name Desulfobacula sp. TS
NCBI BioProject ID 175250
NCBI BioProject Accession PRJNA175250
NCBI Locus Tag
C632  
NCBI BioSample Accession SAMN02692668
PI
Added By JGI automated process on 2014-08-08
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Chungbuk National University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome Sequencing of "Desulfobacula sp. TS", an anaerobic toluene degrading bacterium from oil contaminated tidal flat  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Draft genome sequence of Desulfobacula sp. strain TS
Organism Desulfobacula sp. TS
Analysis Projects Desulfobacula sp. TS
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0101940
Organism Name
Desulfobacula sp. TS  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfobacula  
Genus Synonyms
  
Species
Desulfobacula sp. TS  
Subspecies
  
Species Synonyms
  
Strain
TS  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1232437
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobacteraceae  
NCBI Genus
Desulfobacula  
NCBI Species
Desulfobacula sp. TS  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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