PROJECT INFORMATION
GOLD Project ID
Gp0096825  
Project Name
Paenisporosarcina indica PN2  
Other Names
  
Legacy ER Project ID
74825  
Legacy GOLD ID
Gi0074825  
NCBI BioProject Name Paenisporosarcina indica strain:PN2
NCBI BioProject Accession PRJNA252797
NCBI Locus Tag
GY23  
NCBI BioSample Accession SAMN02863087
PI
Added By JGI automated process on 2014-06-26
Last Modified By Alejandro Rodriguez Mojica on 2018-07-17
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center Centre for Cellular and Molecular Biology (CCMB) (India)
Collaborating Institute
  
Funding Agency
  
Project Description
Draft genome sequencing of Paenisporosarcina indica, isolated from a soil sample collected near the Pindari glacier, Himalayan region.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications International Journal of Systematic and Evolutionary Microbiology 63(Pt 8):2927-33 Paenisporosarcina indica sp. nov., a psychrophilic bacterium from a glacier, and reclassification of Sporosarcina antarctica Yu et al., 2008 as Paenisporosarcina antarctica comb. nov. and emended description of the genus Paenisporosarcina.

SRA Experiment
  
PROJECT COMPOSITION
Study Paenisporosarcina indica strain:PN2 Genome sequencing
Organism Paenisporosarcina indica PN2
Analysis Projects Paenisporosarcina indica PN2
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0106917
Organism Name
Paenisporosarcina indica PN2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Paenisporosarcina  
Genus Synonyms
  
Species
Paenisporosarcina indica  
Subspecies
  
Species Synonyms
  
Strain
PN2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.24403  
Exemplar Name
Paenisporosarcina indica  
Taxon DOI
10.1601/tx.24403  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 650093
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Planococcaceae  
NCBI Genus
Paenisporosarcina  
NCBI Species
Paenisporosarcina indica  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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