PROJECT INFORMATION
GOLD Project ID
Gp0093184  
Project Name
Halolactibacillus sp. JCM 19043  
Other Names
  
Legacy ER Project ID
73301  
Legacy GOLD ID
Gi0073301  
NCBI BioProject Name Halolactibacillus sp. JCM 19043
NCBI BioProject ID 243816
NCBI BioProject Accession PRJDB1616
NCBI Locus Tag
JCM19043  
NCBI BioSample Accession SAMD00000378
PI
Added By JGI automated process on 2014-04-25
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center RIKEN (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
For the promotion of various studies, we perform genome sequencing of the important 300 microbial organisms to human and the environment.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Halolactibacillus sp. JCM 19043
Organism Halolactibacillus sp. JCM 19043
Analysis Projects Halolactibacillus sp. JCM 19043
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0093184
Organism Name
Halolactibacillus sp. JCM 19043  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Halolactibacillus  
Genus Synonyms
  
Species
Halolactibacillus sp. JCM 19043  
Subspecies
  
Species Synonyms
  
Strain
JCM 19043  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 19043  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1460638
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Halolactibacillus  
NCBI Species
Halolactibacillus sp. JCM 19043  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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