PROJECT INFORMATION
GOLD Project ID
Gp0093138  
Project Name
Geobacter toluenoxydans JCM 15764  
Other Names
  
Legacy ER Project ID
73255  
Legacy GOLD ID
Gi0073255  
NCBI BioProject Name Geobacter toluenoxydans JCM 15764
NCBI BioProject ID 243727
NCBI BioProject Accession PRJDB818
NCBI Locus Tag
JCM15764  
NCBI BioSample Accession SAMD00000530
PI
Added By JGI automated process on 2014-04-25
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Tokyo (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
For the promotion of various studies, we perform genome sequencing of the important 300 microbial organisms to human and the environment.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Geobacter toluenoxydans JCM 15764
Organism Geobacter toluenoxydans JCM 15764
Analysis Projects Geobacter toluenoxydans JCM 15764
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0093138
Organism Name
Geobacter toluenoxydans JCM 15764  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Geobacter  
Genus Synonyms
  
Species
Geobacter toluenoxydans  
Subspecies
  
Species Synonyms
  
Strain
JCM 15764  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 15764  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.17814  
Exemplar Name
Geobacter toluenoxydans  
Taxon DOI
10.1601/tx.17814  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1294260
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfuromonadales  
NCBI Family
Geobacteraceae  
NCBI Genus
Geobacter  
NCBI Species
Geobacter toluenoxydans  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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