PROJECT INFORMATION
GOLD Project ID
Gp0090753  
Project Name
Active sludge cell enrichment microbial communities from Klosterneuburg, Austria - Nitrosomonas DOME C08B38  
Other Names
  
Legacy ER Project ID
72209  
Legacy GOLD ID
Gi0072209  
NCBI BioProject Name Active sludge cell enrichment microbial communities from Klosterneuburg, Austria - Nitrosomonas DOME C08B38
NCBI BioProject Accession PRJNA245597
NCBI Locus Tag
EI76  
NCBI BioSample Accession SAMN06161103
Source Sample ID
PI Michael Wagner
Added By JGI automated process on 2014-03-25
Last Modified By JGI automated process on 2022-09-05
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Active sludge cell enrichment microbial communities from wastewater treatment plant in Klosterneuburg, Austria  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome - Cell Enrichment  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/10.25585/60000917
JGI Portal Download Raw Sequence Data
Genome Publications "Science (New York, N.Y.)": 356(6333):82-85 Giant viruses with an expanded complement of translation system components.
PubMed: 28386012 DOI: 10.1126/science.aal4657
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX2482139  (Link to NCBI )
Experiment Title Nitrosomonas DOME C08B38
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM
Library Name WSPP
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Active sludge and wastewater microbial communities from Klosterneuburg, Austria
Biosample Active sludge cell enrichment microbial communities from Klosterneuburg, Austria - Nitrosomonas DOME C08B38
Analysis Projects Active sludge cell enrichment microbial communities from Klosterneuburg, Austria - Nitrosomonas DOME C08B38
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Active sludge cell enrichment microbial communities from Klosterneuburg, Austria - Nitrosomonas DOME C08B38
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID 942017
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
WWTP  
Ecosystem Type
Aerobic digester  
Ecosystem Subtype
Activated sludge  
Specific Ecosystem
  

 

 

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