PROJECT INFORMATION
GOLD Project ID
Gp0048045  
Project Name
Desulfotomaculum profundi Bs107  
Other Names
  
Legacy ER Project ID
57542  
Legacy GOLD ID
Gi0057542  
NCBI BioProject Name Desulfotomaculum profundi strain:Bs107
NCBI BioProject Accession PRJNA217963
NCBI Locus Tag
P378  
NCBI BioSample Accession SAMN07249174
PI
Added By JGI automated process on 2013-10-11
Last Modified By Mahathi Kandimalla on 2021-06-24
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Pau and Pays de L'Adour
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Desulfotomaculum profundi Bs107 Genome sequencing
Organism Desulfotomaculum profundi Bs107
Analysis Projects Desulfotomaculum profundi Bs107
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0048045
Organism Name
Desulfotomaculum profundi Bs107  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfotomaculum  
Genus Synonyms
  
Species
Desulfotomaculum profundi  
Subspecies
  
Species Synonyms
  
Strain
Bs107  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 31387  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.29146  
Exemplar Name
Desulfotomaculum profundi  
Taxon DOI
10.1601/tx.29146  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1383067
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Eubacteriales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulforamulus  
NCBI Species
Desulforamulus profundi  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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