PROJECT INFORMATION
GOLD Project ID
Gp0036738  
Project Name
Enterococcus columbae DSM 7374  
Other Names
  
Legacy ER Project ID
42179  
Legacy GOLD ID
Gi0042179  
NCBI BioProject Name Enterococcus columbae DSM 7374 = ATCC 51263
NCBI BioProject ID 191886
NCBI BioProject Accession PRJNA191886
NCBI Locus Tag
I568  
NCBI BioSample Accession SAMN02596961
PI
Added By JGI automated process on 2013-03-06
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Enterococcus columbae ATCC_51263 PacBio/Illumina Sequencing, Hybrid Assembly and Comparative Analysis Project.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome Sequencing of Enterococcus, Broad Institute
Organism Enterococcus columbae DSM 7374
Analysis Projects Enterococcus columbae DSM 7374
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036738
Organism Name
Enterococcus columbae DSM 7374  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Enterococcus  
Genus Synonyms
  
Species
Enterococcus columbae  
Subspecies
  
Species Synonyms
  
Strain
DSM 7374  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 7374  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5532  
Exemplar Name
Enterococcus columbae  
Taxon DOI
10.1601/tx.5532  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121865
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Enterococcaceae  
NCBI Genus
Enterococcus  
NCBI Species
Enterococcus columbae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 160779
Genbank 16S ID AF061006
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Bird
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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