PROJECT INFORMATION
GOLD Project ID
Gp0036706  
Project Name
Sclerogaster hysterangioides SCL2.BST  
Other Names
  
Legacy ER Project ID
42762  
Legacy GOLD ID
Gi0042762  
NCBI BioProject Name Sclerogaster hysterangioides SCL2.BST
NCBI BioProject ID 256708
NCBI BioProject Accession PRJNA256708
NCBI Locus Tag
JB94  
NCBI BioSample Accession SAMN02950573
PI Joseph Spatafora
Added By JGI automated process on 2013-03-26
Last Modified By JGI automated process on 2020-10-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
1000 Fungal Genomes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid
  
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2050842  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050864  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name USNT
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX2050843  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050844  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050845  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050860  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050861  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050862  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050840  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050841  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050863  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050846  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050847  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050848  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050849  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050853  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050854  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050855  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050856  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050850  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050851  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050852  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050839  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name AGWBH
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
 
SRA Experiment Id SRX2050857  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050858  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2050859  (Link to NCBI )
Experiment Title Sclerogaster hysterangioides SCL2.BST Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name AAYPN
Library Layout SINGLE
Library Instrument PAC_BIO_RS
PROJECT COMPOSITION
Study 1000 Fungal Genomes
Organism Sclerogaster hysterangioides SCL2.BST
Analysis Projects
  
Number of Analysis Projects (AP)
0  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Illumina HiSeq 2000
PacBio RS II
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes; Production RnD, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036278
Organism Name
Sclerogaster hysterangioides SCL2.BST  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Sclerogaster  
Genus Synonyms
  
Species
Sclerogaster hysterangioides  
Subspecies
  
Species Synonyms
  
Strain
SCL2.BST  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1529657
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
  
NCBI Family
  
NCBI Genus
Sclerogaster  
NCBI Species
Sclerogaster hysterangioides  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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