PROJECT INFORMATION
GOLD Project ID
Gp0036326  
Project Name
Radiomyces spectabilis NRRL 2753 Standard Draft  
Other Names
  
Legacy ER Project ID
42442  
Legacy GOLD ID
Gi0042442  
NCBI BioProject Name Radiomyces spectabilis NRRL 2753 Standard Draft
NCBI BioProject ID 366636
NCBI BioProject Accession PRJNA366636
NCBI Locus Tag
BYT42  
NCBI BioSample Accession SAMN06266976
PI Joseph Spatafora
Added By JGI automated process on 2013-03-18
Last Modified By JGI automated process on 2020-10-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
1000 Fungal Genomes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2518206  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518205  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518204  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518203  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518202  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518201  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518200  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518199  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518198  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2518197  (Link to NCBI )
Experiment Title Radiomyces spectabilis NRRL 2753 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BBTNZ
Library Layout SINGLE
Library Instrument PAC_BIO_RS
PROJECT COMPOSITION
Study 1000 Fungal Genomes
Organism Radiomyces spectabilis RSA627
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Illumina HiSeq 2000
PacBio RS II
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036326
Organism Name
Radiomyces spectabilis RSA627  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-MUCOROMYCOTA  
Genus
Radiomyces  
Genus Synonyms
  
Species
Radiomyces spectabilis  
Subspecies
  
Species Synonyms
  
Strain
RSA627  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 64574
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Mucoromycota  
NCBI Class
Mucoromycetes  
NCBI Order
Mucorales  
NCBI Family
Radiomycetaceae  
NCBI Genus
Radiomyces  
NCBI Species
Radiomyces spectabilis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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