PROJECT INFORMATION
GOLD Project ID
Gp0033965  
Project Name
Dehalobacter sp. CF  
Other Names
  
Legacy ER Project ID
39114  
Legacy GOLD ID
Gi22845, Gc02499  
NCBI BioProject Name Dehalobacter sp. CF
NCBI BioProject ID 80805
NCBI BioProject Accession PRJNA80805
NCBI Locus Tag
DCF50  
NCBI BioSample Accession
PI Elizabeth A. Edwards
Added By JGI automated process on 2012-12-17
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Toronto (Canada)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
The sequencing of a chloroform-dechlorinating culture derived from an enrichment culture.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 7(12):e52038 Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic data.
Other Publications
  
PROJECT COMPOSITION
Study Dehalobacter sp. CF
Analysis Projects Dehalobacter sp. CF
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0033965
Organism Name
Dehalobacter sp. CF  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Dehalobacter  
Genus Synonyms
  
Species
Dehalobacter sp. CF  
Subspecies
  
Species Synonyms
  
Strain
CF  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1131462
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Dehalobacter  
NCBI Species
Dehalobacter sp. CF  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab enrichment  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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