PROJECT NAME
GOLD Project ID
Gp0033862  
Project Name
Cronobacter sakazakii 680  
Other Names
  
Legacy ER Project ID
38809  
Legacy GOLD ID
Gi22003  
NCBI BioProject Name Cronobacter sakazakii str. 680
NCBI BioProject ID 181115
NCBI BioProject Accession
PRJEB153  
NCBI Locus Tag
BN126  
NCBI BioSample Accession
SAMEA2272711  
PI
Added By JGI automated process on 2012-11-28
Last Modified By Auto script update processes on 2014-10-31
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Life Technologies (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Cronobacter are food-borne pathogens associated with serious neonatal diseases, including bacteraemia, meningitis and necrotising enterocolitis. The genus is composed of seven species: C. sakazakii, C. malonaticus, C. turicensis, C. dublinensis, C. muytjensii, C. universalis, and C. condimenti. Clinical cases are associated with three species, C. malonaticus, C. turicensis and, in particular, with C. sakazakii multilocus sequence type 4. Thus, it is plausible that virulence determinants have evolved in certain lineages. Methodology/Principal We generated high quality sequence drafts for eleven Cronobacter genomes representing the seven Cronobacter species, including an ST4 strain of C. sakazakii.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 7(11):e49455 Comparative analysis of genome sequences covering the seven cronobacter species.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Cronobacter sakazakii 680
Analysis Projects Cronobacter sakazakii 680
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0033862
Organism Name
Cronobacter sakazakii 680  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Cronobacter  
Genus Synonyms
  
Species
Cronobacter sakazakii  
Subspecies
  
Species Synonyms
  
Strain
680  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1208592
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Cronobacter  
NCBI Species
Cronobacter sakazakii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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