PROJECT INFORMATION
GOLD Project ID
Gp0032910  
Project Name
Neisseria weaveri LMG 5135  
Other Names
  
Legacy ER Project ID
38022  
Legacy GOLD ID
Gpto38022, Gi21869  
NCBI BioProject Name Neisseria weaveri LMG 5135
NCBI BioProject ID 68581
NCBI BioProject Accession PRJNA68581
NCBI Locus Tag
I11  
NCBI BioSample Accession SAMN02470907
PI Chun,J
Added By JGI automated process on 2012-11-01
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Comparative analysis
Sequencing Center Seoul National University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Comparative genomics of Neisseria weaveri species  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications FEMS microbiology letters 328(2):100-5 Comparative genomics of Neisseria weaveri clarifies the taxonomy of this species and identifies genetic determinants that may be associated with virulence.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Neisseria weaveri LMG 5135
Organism Neisseria weaveri LMG 5135
Analysis Projects Neisseria weaveri LMG 5135
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
49  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0032910
Organism Name
Neisseria weaveri LMG 5135  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Neisseria  
Genus Synonyms
  
Species
Neisseria weaveri  
Subspecies
  
Species Synonyms
  
Strain
LMG 5135  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
LMG 5135  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1933  
Exemplar Name
Neisseria weaveri  
Taxon DOI
10.1601/tx.1933  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1051985
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Neisseriales  
NCBI Family
Neisseriaceae  
NCBI Genus
Neisseria  
NCBI Species
Neisseria weaveri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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