PROJECT INFORMATION | |||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GOLD Project ID
![]() |
Gp0028719
|
||||||||||||||||||||
Project Name
![]() |
Bacillus psychrosaccharolyticus ATCC 23296
|
||||||||||||||||||||
Other Names
![]() |
|
||||||||||||||||||||
Legacy ER Project ID
![]() |
30906
|
||||||||||||||||||||
Legacy GOLD ID
![]() |
Gpto30906, Gi21950
|
||||||||||||||||||||
NCBI BioProject Name | Bacillus psychrosaccharolyticus ATCC 23296 | ||||||||||||||||||||
NCBI BioProject ID
![]() |
159255 |
||||||||||||||||||||
NCBI BioProject Accession
![]() |
PRJNA159255 |
||||||||||||||||||||
NCBI Locus Tag
![]() |
WYK
|
||||||||||||||||||||
NCBI BioSample Accession
![]() |
SAMN00857837 |
||||||||||||||||||||
PI | |||||||||||||||||||||
Added By |
JGI automated process
on 2012-10-16 |
||||||||||||||||||||
Last Modified By |
JGI automated process
on 2014-03-26 |
||||||||||||||||||||
Project Comments |
|
||||||||||||||||||||
Project Status
![]() |
Permanent Draft
|
||||||||||||||||||||
Project Relevance
![]() |
Industrial |
||||||||||||||||||||
Sequencing Center
![]() |
Complutense University of Madrid
(Spain)
|
||||||||||||||||||||
Collaborating Institute
![]() |
|
||||||||||||||||||||
Funding Agency
![]() |
|
||||||||||||||||||||
Project Description
![]() |
Bacillus psychrosaccharolyticus Genome Sequencing Project.
|
||||||||||||||||||||
Is JGI Project |
No
|
||||||||||||||||||||
Project Information Visibility
![]() |
Public | ||||||||||||||||||||
PROJECT TYPE | |||||||||||||||||||||
Specimen
![]() |
Organism |
||||||||||||||||||||
Nucleic Acid
![]() |
DNA |
||||||||||||||||||||
Sequencing Strategy
![]() |
Whole Genome Sequencing
|
||||||||||||||||||||
EXTERNAL PROJECT LINKS | |||||||||||||||||||||
Project Information
![]() |
|
||||||||||||||||||||
Database
![]() |
|
||||||||||||||||||||
Genome Publications
![]() |
Genome announcements
Genome of the Psychrophilic Bacterium Bacillus psychrosaccharolyticus, a Potential Source of 2'-Deoxyribosyltransferase for Industrial Nucleoside Synthesis.
|
||||||||||||||||||||
Other Publications
![]() |
|
||||||||||||||||||||
SRA Experiment |
|
||||||||||||||||||||
PROJECT COMPOSITION | |||||||||||||||||||||
Study |
Bacillus psychrosaccharolyticus ATCC 23296 |
||||||||||||||||||||
Organism |
Bacillus psychrosaccharolyticus ATCC 23296 |
||||||||||||||||||||
Analysis Projects |
Bacillus psychrosaccharolyticus ATCC 23296 |
||||||||||||||||||||
Number of Analysis Projects (AP) |
1 |
||||||||||||||||||||
Number of Derived Analyis Projects (DAP) |
0
|
SEQUENCING INFORMATION | |
---|---|
Sequencing Status
![]() |
Complete |
Sequencing Quality (MIGS-31) |
Level 1: Standard Draft |
Finishing Goal
![]() |
|
Contamination Screening Input
![]() |
|
DNA Amplification Method
![]() |
|
Sequencing Comments
![]() |
|
DNA Amplification Kit
![]() |
|
Sequencing Technology
(MIGS-29)
![]() |
454 |
Library Method
(MIGS-28)
![]() |
|
Library Layout
![]() |
|
Library Screening Method
![]() |
|
Number Of Reads
![]() |
|
Read Size
![]() |
|
Vector
![]() |
|
GC Percent |
39
|
Chromosome Count |
|
Plasmid Count |
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0028719 |
Organism Name |
Bacillus psychrosaccharolyticus ATCC 23296
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
FIRMICUTES
|
Genus |
Bacillus
|
Genus Synonyms |
|
Species |
Bacillus psychrosaccharolyticus
|
Subspecies |
|
Species Synonyms |
|
Strain |
ATCC 23296
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
ATCC 23296
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.4969
|
Exemplar Name |
Peribacillus psychrosaccharolyticus
|
Taxon DOI |
10.1601/tx.36089
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
![]() |
|
NCBI Taxonomy ID |
1174504 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Firmicutes
|
NCBI Class |
Bacilli
|
NCBI Order |
Bacillales
|
NCBI Family |
Bacillaceae
|
NCBI Genus |
Peribacillus
|
NCBI Species |
Peribacillus psychrosaccharolyticus
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Terrestrial
|
Ecosystem Type |
Soil
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
X60635 |
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
|
Cell Shape |
|
Motility |
|
Sporulation |
|
Temperature Range |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships |
|
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
|
Known Habitats |
Soil |
Metabolisms |
|
Phenotypes |
|
Energy Sources |
|
CYANOBACTERIA METADATA | |
Filaments |
|
Filament Type |
|
Differentiated Cells |
|
Position Of Heterocysts |
|
Cysts |
|
Mode Of Reproduction |
|
Trichome |
|
Trichome Type |
|
Carotenoids |
|
Pigments |
|
Phage Infectivity |
|
Phage Type |
|
Restriction Enzyme |
|
Toxin Production |
|
Toxin Type |
|
Secondary Metabolites |
|
Developmental Cycle |
|
Branching |
|
Gas Vesicles |
|
Gas Vesicle Type |
|
Diagnostic Inclusion Body Information |
|
Extracellular Structures |
|
Bloom Forming |
|
Pigment Type |
|
Complementary chromatic adaptation (CCA) |
|
Medium Types |
|
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?
Changing the SP Sequencing Strategy will also effect these items:
Do you want to continue with this Sequencing Strategy change?