Studies
|
54,051 |
|
Biosamples
|
174,371 |
|
Sequencing Projects
|
485,183 |
|
Analysis Projects
|
368,788 |
| Organisms | 468,050 |
| PROJECT INFORMATION | |||||||||||||||||||||
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GOLD Project ID
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Gp0028719
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Project Name
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Peribacillus psychrosaccharolyticus ATCC 23296
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Other Names
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Legacy ER Project ID
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30906
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Legacy GOLD ID
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Gpto30906, Gi21950
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| NCBI BioProject Name | Peribacillus psychrosaccharolyticus ATCC 23296 | ||||||||||||||||||||
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NCBI BioProject Accession
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PRJNA159255 |
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NCBI Locus Tag
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WYK
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NCBI BioSample Accession
|
SAMN00857837 |
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| PI | |||||||||||||||||||||
| Added By |
JGI automated process
on 2012-10-16 |
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| Last Modified By |
Mahathi Kandimalla
on 2022-05-02 |
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| Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Industrial |
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Sequencing Center
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Universidad Complutense de Madrid
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Collaborating Institute
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Funding Agency
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Project Description
|
Peribacillus psychrosaccharolyticus Genome Sequencing Project.
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| Is JGI Project |
No
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Project Information Visibility
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Public | ||||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||||
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Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||||
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JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Genome announcements
Genome of the Psychrophilic Bacterium Bacillus psychrosaccharolyticus, a Potential Source of 2'-Deoxyribosyltransferase for Industrial Nucleoside Synthesis.
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||||
| Study |
Peribacillus psychrosaccharolyticus ATCC 23296 |
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| Organism |
Peribacillus psychrosaccharolyticus ATCC 23296 |
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| Analysis Projects |
Peribacillus psychrosaccharolyticus ATCC 23296 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
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| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 1: Standard Draft |
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Finishing Goal
|
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Contamination Screening Input
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DNA Amplification Method
|
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
|
|
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Sequencing Comments
|
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DNA Amplification Kit
|
|
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Sequencing Technology
(MIGS-29)
|
454 |
|
Library Method
(MIGS-28)
|
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Library Layout
|
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Library Screening Method
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Number Of Reads
|
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Read Size
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Vector
|
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| GC Percent |
39
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0028719 |
| Organism Name |
Peribacillus psychrosaccharolyticus ATCC 23296
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
FIRMICUTES
|
| Genus |
Peribacillus
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| Genus Synonyms |
|
| Species |
Peribacillus psychrosaccharolyticus
|
| Subspecies |
|
| Species Synonyms |
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| Strain |
ATCC 23296
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
ATCC 23296
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4969
|
| Exemplar Name |
Peribacillus psychrosaccharolyticus
|
| Taxon DOI |
10.1601/tx.36089
|
| Biosafety Level |
1
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
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ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1174504 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Firmicutes
|
| NCBI Class |
Bacilli
|
| NCBI Order |
Bacillales
|
| NCBI Family |
Bacillaceae
|
| NCBI Genus |
Peribacillus
|
| NCBI Species |
Peribacillus psychrosaccharolyticus
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
|
| Ecosystem Category |
Terrestrial
|
| Ecosystem Type |
Soil
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
X60635 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
Gram+
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
Soil |
| Metabolisms |
|
| Phenotypes |
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| Energy Sources |
|
| CYANOBACTERIA METADATA | |
| Filaments |
|
| Filament Type |
|
| Differentiated Cells |
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| Position Of Heterocysts |
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| Cysts |
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| Mode Of Reproduction |
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| Trichome |
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| Trichome Type |
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| Carotenoids |
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| Pigments |
|
| Phage Infectivity |
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| Phage Type |
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| Restriction Enzyme |
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| Toxin Production |
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| Toxin Type |
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| Secondary Metabolites |
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| Developmental Cycle |
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| Branching |
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| Gas Vesicles |
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| Gas Vesicle Type |
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| Diagnostic Inclusion Body Information |
|
| Extracellular Structures |
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| Bloom Forming |
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| Pigment Type |
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| Complementary chromatic adaptation (CCA) |
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| Medium Types |
|
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