PROJECT INFORMATION
GOLD Project ID
Gp0024811  
Project Name
Oceanithermus desulfurans NBRC 100063  
Other Names
  
Legacy ER Project ID
29120  
Legacy GOLD ID
Gi21071  
NCBI BioProject Name Oceanithermus desulfurans NBRC 100063
NCBI BioProject Accession PRJDB493
NCBI Locus Tag
ODE01S  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-09-06
Last Modified By Nikos Kyrpides on 2012-10-22
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Oceanithermus desulfurans NBRC 100063 genome sequencing project  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Oceanithermus desulfurans NBRC 100063
Organism Oceanithermus desulfurans NBRC 100063
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0024811
Organism Name
Oceanithermus desulfurans NBRC 100063  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Oceanithermus  
Genus Synonyms
  
Species
Oceanithermus desulfurans  
Subspecies
  
Species Synonyms
  
Strain
St55B  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 100063  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8752  
Exemplar Name
Oceanithermus desulfurans  
Taxon DOI
10.1601/tx.8752  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1227550
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Thermales  
NCBI Family
Thermaceae  
NCBI Genus
Oceanithermus  
NCBI Species
Oceanithermus desulfurans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Hot spring
Aquatic
Hydrothermal vent
Deep sea
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?