PROJECT INFORMATION
GOLD Project ID
Gp0024004  
Project Name
Paenisporosarcina sp. TG20  
Other Names
  
Legacy ER Project ID
28777  
Legacy GOLD ID
Gi20737  
NCBI BioProject Name Paenisporosarcina sp. TG20
NCBI BioProject Accession PRJNA170891
NCBI Locus Tag
B371  
NCBI BioSample Accession SAMN02470170
PI
Added By JGI automated process on 2012-08-29
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Korea Polar Research Institute (KOPRI) (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Draft genome sequence of a bacterium from sediment-laden stratified basal ice from Taylor Glacier, McMurdo Dry Valleys, Antarctica.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Journal of bacteriology 194(23):6636 Draft genome sequence of Paenisporosarcina sp. strain TG-20, a psychrophilic bacterium isolated from the basal ice of Taylor Glacier.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Paenisporosarcina quisquiliarum TG20
Organism Paenisporosarcina sp. TG20
Analysis Projects Paenisporosarcina sp. TG20
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0024004
Organism Name
Paenisporosarcina sp. TG20  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Paenisporosarcina  
Genus Synonyms
  
Species
Paenisporosarcina sp. TG20  
Subspecies
  
Species Synonyms
  
Strain
TG20  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1211706
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Planococcaceae  
NCBI Genus
Paenisporosarcina  
NCBI Species
Paenisporosarcina sp. TG20  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Ice  
Specific Ecosystem
Glacier  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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