PROJECT NAME
GOLD Project ID
Gp0021754  
Project Name
Parascardovia denticolens IPLA 20019  
Other Names
  
Legacy ER Project ID
25804  
Legacy GOLD ID
Gi17934  
NCBI BioProject Name Parascardovia denticolens IPLA 20019
NCBI BioProject ID 167218
NCBI BioProject Accession
PRJNA167218  
NCBI Locus Tag
A200  
NCBI BioSample Accession
SAMN02470079  
PI
Added By JGI automated process on 2012-06-08 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Dairy Institute of Asturias (IPLA), The Higher Council for Scientific Research (CSIC) (Spain)
Collaborating Institute
  
Funding Agency
  
Project Description
This species is taxonomically related to the genus Bifidobacteriu. Strain IPLA 20019 was isolated from human breast milk.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(17):4776-7 Genome sequence of Parascardovia denticolens IPLA 20019, isolated from human breast milk.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Parascardovia denticolens IPLA 20019
Analysis Projects Parascardovia denticolens IPLA 20019
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021754
Organism Name
Parascardovia denticolens IPLA 20019  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Parascardovia  
Genus Synonyms
  
Species
Parascardovia denticolens  
Subspecies
  
Species Synonyms
  
Strain
IPLA 20019  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1193128
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Bifidobacteriales  
NCBI Family
Bifidobacteriaceae  
NCBI Genus
Parascardovia  
NCBI Species
Parascardovia denticolens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Milk  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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