PROJECT INFORMATION
GOLD Project ID
Gp0021381  
Project Name
Loigolactobacillus coryniformis coryniformis CECT 5711  
Other Names
  
Legacy ER Project ID
25491  
Legacy GOLD ID
Gi17664  
NCBI BioProject Name Loigolactobacillus coryniformis subsp. coryniformis CECT 5711
NCBI BioProject Accession PRJNA163365
NCBI Locus Tag
A11Y  
NCBI BioSample Accession SAMN02471360
PI
Added By JGI automated process on 2012-05-18
Last Modified By Supratim Mukherjee on 2020-10-28
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Era7 bioinformatics (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
To improve the knowledge of the genome of this artisan goat?s milk cheese isolate, which exhibits peculiar probiotic properties.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Lactobacillus coryniformis coryniformis CECT 5711
Organism Loigolactobacillus coryniformis coryniformis CECT 5711
Analysis Projects Loigolactobacillus coryniformis coryniformis CECT 5711
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021381
Organism Name
Loigolactobacillus coryniformis coryniformis CECT 5711  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Loigolactobacillus  
Genus Synonyms
  
Species
Loigolactobacillus coryniformis  
Subspecies
coryniformis  
Species Synonyms
  
Strain
CECT 5711  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CECT 5711  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1185325
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Loigolactobacillus  
NCBI Species
Loigolactobacillus coryniformis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Dairy products  
Ecosystem Subtype
Fermented dairy products  
Specific Ecosystem
Cheese  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes Probiotic
Energy Sources Heterotroph

 

 

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