PROJECT INFORMATION
GOLD Project ID
Gp0021087  
Project Name
Neocallimastix patriciarum 27  
Other Names
  
Legacy ER Project ID
25018  
Legacy GOLD ID
Gt00244  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Adrian Tsang
Added By Tatiparthi Reddy on 2012-05-15
Last Modified By Tatiparthi Reddy on 2012-05-18
Project Comments
  
Project Status
incomplete  
Project Relevance Environmental
Sequencing Center McGill University (Canada)
Genome Quebec (Canada)
Collaborating Institute Concordia University
Funding Agency Genome Canada (Canada)
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid RNA
Sequencing Strategy
Transcriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genozymes
Organism Neocallimastix patriciarum 27
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021087
Organism Name
Neocallimastix patriciarum 27  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-CHYTRIDIOMYCOTA  
Genus
Neocallimastix  
Genus Synonyms
  
Species
Neocallimastix patriciarum  
Subspecies
  
Species Synonyms
  
Strain
27  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
LRC 2007  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 4758
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Chytridiomycota  
NCBI Class
Neocallimastigomycetes  
NCBI Order
Neocallimastigales  
NCBI Family
Neocallimastigaceae  
NCBI Genus
Neocallimastix  
NCBI Species
Neocallimastix patriciarum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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