PROJECT NAME
GOLD Project ID
Gp0020669  
Project Name
Lactobacillus oligofermentans LMG 22743  
Other Names
  
Legacy ER Project ID
9892  
Legacy GOLD ID
Gi16981  
NCBI BioProject Name Lactobacillus oligofermentans LMG 22743
NCBI BioProject ID 109293
NCBI BioProject Accession
PRJEA109293  
NCBI Locus Tag
LACOL  
NCBI BioSample Accession
  
PI Johanna Bjorkroth
Added By JGI automated process on 2012-04-04 00:00:00.0
Last Modified By Tatiparthi B. Reddy on 2012-05-09 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Biotechnological
Food industry
Sequencing Center University of Helsinki (Finland)
Collaborating Institute University of Helsinki (Finland)
Funding Agency
  
Project Description
Lactobacillus oligofermentans LMG 22743 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Microbial ecology research on food spoilage bacteria
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0020669
Organism Name
Lactobacillus oligofermentans LMG 22743  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus oligofermentans  
Subspecies
  
Species Synonyms
  
Strain
LMG 22743  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
LMG 22743  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9687  
Exemplar Name
Lactobacillus oligofermentans  
Taxon DOI
10.1601/tx.9687  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1165871
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus oligofermentans  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Psychrotrophic  
Temperature Optimum
25oC  
Salinity
  
pH
7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Meat food product
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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