PROJECT NAME
GOLD Project ID
Gp0020627  
Project Name
Herbaspirillum lusitanum P6-12  
Other Names
  
Legacy ER Project ID
9872  
Legacy GOLD ID
Gi16961  
NCBI BioProject Name Herbaspirillum lusitanum P6-12
NCBI BioProject ID 89453
NCBI BioProject Accession
PRJNA89453  
NCBI Locus Tag
HLUSI  
NCBI BioSample Accession
SAMN02469784  
PI
Added By JGI automated process on 2012-04-04
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Federal University of Parana (Brazil)
Collaborating Institute
  
Funding Agency
  
Project Description
Herbaspirillum lusitanum P6-12 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(15):4136-7 Draft genome sequence of Herbaspirillum lusitanum P6-12, an endophyte isolated from root nodules of Phaseolus vulgaris.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Herbaspirillum lusitanum P6-12
Analysis Projects Herbaspirillum lusitanum P6-12
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) SOLiD
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0020627
Organism Name
Herbaspirillum lusitanum P6-12  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Herbaspirillum  
Genus Synonyms
  
Species
Herbaspirillum lusitanum  
Subspecies
  
Species Synonyms
  
Strain
P6-12  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17154  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1708  
Exemplar Name
Herbaspirillum lusitanum  
Taxon DOI
10.1601/tx.1708  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1161913
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Oxalobacteraceae  
NCBI Genus
Herbaspirillum  
NCBI Species
Herbaspirillum lusitanum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 371295
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28 C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Soil
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources Heterotroph

 

 

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