PROJECT INFORMATION
GOLD Project ID
Gp0020586  
Project Name
Candidatus Endolissoclinum patella L2  
Other Names
  
Legacy ER Project ID
40227  
Legacy GOLD ID
Gc02491  
NCBI BioProject Name Candidatus Endolissoclinum faulkneri L2
NCBI BioProject ID 164601
NCBI BioProject Accession PRJNA164601
NCBI Locus Tag
A1OE  
NCBI BioSample Accession SAMN02604248
PI Eric Schmidt
Added By Tatiparthi Reddy on 2013-01-23
Last Modified By Alejandro Rodriguez Mojica on 2018-07-12
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Medical
Sequencing Center University of Utah (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Uncultivated symbiotic bacterium in the ascidian, Lissoclinum patella collected in Fiji at 3 m depth in a coral reef.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 109(50):20655-60 Genome streamlining and chemical defense in a coral reef symbiosis.
Other Publications
  
PROJECT COMPOSITION
Study Candidatus Endolissoclinum patella L2
Analysis Projects Candidatus Endolissoclinum patella L2 (unscreened)
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0020586
Organism Name
Candidatus Endolissoclinum patella L2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
  
Genus Synonyms
  
Species
Candidatus Endolissoclinum patella L2  
Subspecies
  
Species Synonyms
  
Strain
L2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Single Cell  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1193729
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Rhodospirillaceae  
NCBI Genus
Candidatus Endolissoclinum  
NCBI Species
Candidatus Endolissoclinum faulkneri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Cnidaria  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Mutualistic  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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