PROJECT NAME
GOLD Project ID
Gp0020557  
Project Name
Pseudomonas avellanae BPIC 631  
Other Names
  
Legacy ER Project ID
9826  
Legacy GOLD ID
Gi16915  
NCBI BioProject Name Pseudomonas avellanae BPIC 631
NCBI BioProject ID 84293
NCBI BioProject Accession
PRJNA84293  
NCBI Locus Tag
PAV631  
NCBI BioSample Accession
SAMN02471966  
PI
Added By JGI automated process on 2012-04-04
Last Modified By Auto script update processes on 2014-10-31
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center University of Toronto (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome Sequencing of Pseudomonas avellanae, cause of bacterial canker of hazelnut in Greece and Italy  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC microbiology 12(141):141 Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Genome Sequencing of Pseudomonas avellanae, cause of bacterial canker of hazelnut in Greece and Italy
Analysis Projects Pseudomonas avellanae BPIC 631
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAiix
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0020557
Organism Name
Pseudomonas avellanae BPIC 631  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas avellanae  
Subspecies
  
Species Synonyms
  
Strain
BPIC 631  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
BPIC 631  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2567  
Exemplar Name
Pseudomonas avellanae  
Taxon DOI
10.1601/tx.2567  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1154758
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas avellanae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 162878
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?