PROJECT NAME
GOLD Project ID
Gp0019054  
Project Name
Helicobacter canis ATCC 51401  
Other Names
  
Legacy ER Project ID
24227  
Legacy GOLD ID
Gi15311  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Nikos Kyrpides
Added By JGI automated process on 2012-03-02 00:00:00.0
Last Modified By JGI automated process on 2014-07-17 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
targeted  
Project Relevance GEBA-KMG
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute DOE Joint Genome Institute (JGI) (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Analysis Projects Helicobacter canis ATCC 51401
SEQUENCING INFORMATION
Sequencing Status Awaiting Sample
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Illumina HiSeq 2000
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0019054
Organism Name
Helicobacter canis ATCC 51401  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-EPSILON  
Genus
Helicobacter  
Genus Synonyms
  
Species
Helicobacter canis  
Subspecies
  
Species Synonyms
  
Strain
ATCC 51401  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 51401  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3839  
Exemplar Name
Helicobacter canis  
Taxon DOI
10.1601/tx.3839  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 29419
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Epsilonproteobacteria  
NCBI Order
Campylobacterales  
NCBI Family
Helicobacteraceae  
NCBI Genus
Helicobacter  
NCBI Species
Helicobacter canis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Fecal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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