Studies
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56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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GOLD Project ID
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Gp0018635
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Project Name
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Entomoplasma melaleucae ATCC 49191
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Other Names
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Legacy ER Project ID
|
24349
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Legacy GOLD ID
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Gi15303
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| NCBI BioProject Name | Entomoplasma melaleucae ATCC 49191 | ||||||||||||||||||
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NCBI BioProject Accession
|
PRJNA223073 |
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NCBI Locus Tag
|
T379
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NCBI BioSample Accession
|
SAMN02743375 |
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Source Sample ID
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| PI | Nikos Kyrpides | ||||||||||||||||||
| Added By | JGI automated process on 2012-03-02 | ||||||||||||||||||
| Last Modified By | JGI automated process on 2022-09-05 | ||||||||||||||||||
| Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Tree of Life GEBA-KMG |
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Sequencing Center
|
DOE Joint Genome Institute (JGI)
(USA)
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Collaborating Institute
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DOE Joint Genome Institute (JGI)
(USA)
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Funding Agency
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U.S. Department of Energy (DOE)
(USA)
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Project Description
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|
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| Is JGI Project |
Yes
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Project Information Visibility
|
Public | ||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||
|
Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
|
Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||
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JGI Data Utilization Status
|
Unrestricted
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JGI Award DOI
|
10.46936/10.25585/60000886 |
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| JGI Portal Download | Raw Sequence Data | ||||||||||||||||||
|
Genome Publications
|
Nature biotechnology: 35(7):676-683 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. PubMed: 28604660 DOI: 10.1038/nbt.3886 |
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project |
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| Organism |
Entomoplasma melaleucae ATCC 49191 |
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| Analysis Projects |
Entomoplasma melaleucae ATCC 49191 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
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| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 1: Standard Draft |
|
Finishing Goal
|
Level 1: Standard Draft |
|
Contamination Screening Input
|
|
|
DNA Amplification Method
|
|
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Single Cell Lysis Protocol
|
|
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Single Cell Lysis Approach
|
|
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Sequencing Comments
|
|
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DNA Amplification Kit
|
|
|
Sequencing Technology
(MIGS-29)
|
Illumina HiSeq 2500 |
|
Library Method
(MIGS-28)
|
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Library Layout
|
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Library Screening Method
|
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Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
27
|
| Chromosome Count |
|
| Plasmid Count |
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0018635 |
| Organism Name |
Entomoplasma melaleucae ATCC 49191
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
MYCOPLASMATOTA
|
| Genus |
Entomoplasma
|
| Genus Synonyms |
|
| Species |
Entomoplasma melaleucae
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
ATCC 49191
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
ATCC 49191
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4697
|
| Exemplar Name |
Mesoplasma melaleucae
|
| Taxon DOI |
10.1601/tx.34364
|
| Biosafety Level |
2
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1408435 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Mycoplasmatota
|
| NCBI Class |
Mollicutes
|
| NCBI Order |
Entomoplasmatales
|
| NCBI Family |
Entomoplasmataceae
|
| NCBI Genus |
Mesoplasma
|
| NCBI Species |
Mesoplasma melaleucae
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Host-associated
|
| Ecosystem Category |
Plants
|
| Ecosystem Type |
Unclassified
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
|
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
|
| Cell Shape |
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| Motility |
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| Sporulation |
|
| Temperature Range |
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| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram+
|
| Biotic Relationships |
|
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
|
| Known Habitats |
Plants |
| Metabolisms |
|
| Phenotypes |
|
| Energy Sources |
|
| CYANOBACTERIA METADATA | |
| Filaments |
|
| Filament Type |
|
| Differentiated Cells |
|
| Position Of Heterocysts |
|
| Cysts |
|
| Mode Of Reproduction |
|
| Trichome |
|
| Trichome Type |
|
| Carotenoids |
|
| Pigments |
|
| Phage Infectivity |
|
| Phage Type |
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| Restriction Enzyme |
|
| Toxin Production |
|
| Toxin Type |
|
| Secondary Metabolites |
|
| Developmental Cycle |
|
| Branching |
|
| Gas Vesicles |
|
| Gas Vesicle Type |
|
| Diagnostic Inclusion Body Information |
|
| Extracellular Structures |
|
| Bloom Forming |
|
| Pigment Type |
|
| Complementary chromatic adaptation (CCA) |
|
| Medium Types |
|
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