PROJECT INFORMATION
GOLD Project ID
Gp0018176  
Project Name
Thermomicrobium sp. HL1  
Other Names
  
Legacy ER Project ID
8080  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
Source Sample ID
PI Jose de la Torre
Added By Jose de la Torre on 2012-02-13
Last Modified By Jose de la Torre on 2012-02-16
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center San Francisco State University (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Thermomicrobium sp. HL1
Organism Thermomicrobium sp. HL1
Analysis Projects Thermomicrobium sp. HL1
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal Level 2: High-Quality Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0018176
Organism Name
Thermomicrobium sp. HL1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOMICROBIOTA  
Genus
Thermomicrobium  
Genus Synonyms
  
Species
Thermomicrobium sp. HL1  
Subspecies
  
Species Synonyms
  
Strain
HL1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 499
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermomicrobiota  
NCBI Class
Thermomicrobia  
NCBI Order
Thermomicrobiales  
NCBI Family
Thermomicrobiaceae  
NCBI Genus
Thermomicrobium  
NCBI Species
  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Salinity
  
pH
8  
Cell Diameter
0.3 um  
Cell Length
1.5 um  
Color
  
Gram Staining
  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases
  
Known Habitats Sediment
Hot spring
Metabolisms Denitrifying
Phenotypes Nitrogen cycle
Energy Sources
  

 

 

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