PROJECT NAME
GOLD Project ID
Gp0016972  
Project Name
Colletotrichum navitas 9038-158a (CBS125086)  
Other Names
  
Legacy ER Project ID
22972  
Legacy GOLD ID
Gi14112  
NCBI BioProject Name Colletotrichum navitas strain:9038-158a (CBS125086)
NCBI BioProject ID 262371
NCBI BioProject Accession
PRJNA262371  
NCBI Locus Tag
LY79  
NCBI BioSample Accession
SAMN05660908  
PI Jo Anne Crouch
Added By JGI automated process on 2012-02-08
Last Modified By JGI automated process on 2014-09-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute U.S. Department of Agriculture, Agricultural Research Service (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Colletotrichum pathogenicity and endophytism - 5 species
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Illumina HiSeq 2500
Illumina HiSeq 2500-1TB
PacBio RS
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes; Illumina Regular Fragment, 300bp, Tubes; Illumina Regular LMP, 4kb, CLRS  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016972
Organism Name
Colletotrichum navitas 9038-158a (CBS125086)  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Colletotrichum  
Genus Synonyms
  
Species
Colletotrichum navitas  
Subspecies
  
Species Synonyms
  
Strain
9038-158a (CBS125086)  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 681940
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Sordariomycetes  
NCBI Order
Glomerellales  
NCBI Family
Glomerellaceae  
NCBI Genus
Colletotrichum  
NCBI Species
Colletotrichum navitas  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?