PROJECT NAME
GOLD Project ID
Gp0016724  
Project Name
Bdellovibrio bacteriovorus Tiberius  
Other Names
  
Legacy ER Project ID
7650  
Legacy GOLD ID
Gi13366, Gc02422  
NCBI BioProject Name Bdellovibrio bacteriovorus Tiberius
NCBI BioProject ID 70801
NCBI BioProject Accession
PRJNA70801  
NCBI Locus Tag
BDT  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-02-02
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center University of Nottingham (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
The genome sequence of a novel Bdellovibrio isolate that reveals both ancient and recent horizontal gene transfer when compared to the laboratory strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 13(670):670 Genome analysis of a simultaneously predatory and prey-independent, novel Bdellovibrio bacteriovorus from the River Tiber, supports in silico predictions of both ancient and recent lateral gene transfer from diverse bacteria.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Bdellovibrio bacteriovorus Tiberius
Analysis Projects Bdellovibrio bacteriovorus Tiberius
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0016724
Organism Name
Bdellovibrio bacteriovorus Tiberius  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Bdellovibrio  
Genus Synonyms
  
Species
Bdellovibrio bacteriovorus  
Subspecies
  
Species Synonyms
  
Strain
Tiberius  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1069642
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Bdellovibrionales  
NCBI Family
Bdellovibrionaceae  
NCBI Genus
Bdellovibrio  
NCBI Species
Bdellovibrio bacteriovorus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Vibrio-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
  
Temperature Optimum
29C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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