PROJECT NAME
GOLD Project ID
Gp0016498  
Project Name
Pectobacterium atrosepticum ICMP 1526  
Other Names
  
Legacy ER Project ID
7598  
Legacy GOLD ID
Gi13314  
NCBI BioProject Name Pectobacterium atrosepticum ICMP 1526
NCBI BioProject ID 72123
NCBI BioProject Accession
PRJNA72123  
NCBI Locus Tag
KCQ  
NCBI BioSample Accession
SAMN03780058  
PI
Added By JGI automated process on 2012-02-02
Last Modified By Eriana Panopoulos on 2012-06-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center The New Zealand Institute for Plant and Food Research Limited (New Zealand)
Collaborating Institute
  
Funding Agency
  
Project Description
Pectobacterium atrosepticum ICMP 1526 Genome Sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pectobacterium atrosepticum ICMP 1526
Analysis Projects Pectobacterium atrosepticum ICMP 1526
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016498
Organism Name
Pectobacterium atrosepticum ICMP 1526  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pectobacterium  
Genus Synonyms
  
Species
Pectobacterium atrosepticum  
Subspecies
  
Species Synonyms
  
Strain
ICMP 1526  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3175  
Exemplar Name
Pectobacterium atrosepticum  
Taxon DOI
10.1601/tx.3247  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1076138
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Pectobacterium  
NCBI Species
Pectobacterium atrosepticum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
27-30C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Blackleg
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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