PROJECT NAME
GOLD Project ID
Gp0016107  
Project Name
Methylosarcina lacus LW14  
Other Names
  
Legacy ER Project ID
21913  
Legacy GOLD ID
Gi13956  
NCBI BioProject Name Methylosarcina lacus LW14
NCBI BioProject ID 161599
NCBI BioProject Accession
PRJNA161599  
NCBI Locus Tag
Metla  
NCBI BioSample Accession
SAMN02597192  
PI Lumila Chistoserdova
Added By JGI automated process on 2012-01-27
Last Modified By Rida Ali on 2015-08-28
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Methylosarcina lacus LW14 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Genome announcements Draft genome sequences of gammaproteobacterial methanotrophs isolated from lake washington sediment.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Genomes of fifty methylotrophs isolated from Lake Washington
Analysis Projects Methylosarcina lacus LW14
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Unknown
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016107
Organism Name
Methylosarcina lacus LW14  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Methylosarcina  
Genus Synonyms
  
Species
Methylosarcina lacus  
Subspecies
  
Species Synonyms
  
Strain
LW14  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9727  
Exemplar Name
Methylosarcina lacus  
Taxon DOI
10.1601/tx.9727  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1114263
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Methylococcales  
NCBI Family
Methylococcaceae  
NCBI Genus
Methylosarcina  
NCBI Species
Methylosarcina lacus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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