PROJECT NAME
GOLD Project ID
Gp0015851  
Project Name
Halomicrobium katesii DSM 19301  
Other Names
  
Legacy ER Project ID
21848  
Legacy GOLD ID
Gi13992  
NCBI BioProject Name Halomicrobium katesii DSM 19301
NCBI BioProject ID 88127
NCBI BioProject Accession
PRJNA88127  
NCBI Locus Tag
Halka  
NCBI BioSample Accession
SAMN02261322  
PI Jonathan Eisen
Added By JGI automated process on 2012-01-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Halomicrobium katesii DSM 19301 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Halomicrobium katesii DSM 19301
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Unknown
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0015851
Organism Name
Halomicrobium katesii DSM 19301  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halomicrobium  
Genus Synonyms
  
Species
Halomicrobium katesii  
Subspecies
  
Species Synonyms
  
Strain
DSM 19301  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 19301  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13348  
Exemplar Name
Halomicrobium katesii  
Taxon DOI
10.1601/tx.13348  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1069082
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Halobacteriales  
NCBI Family
Halobacteriaceae  
NCBI Genus
Halomicrobium  
NCBI Species
Halomicrobium katesii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID EF533994
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Lake
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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