PROJECT NAME
GOLD Project ID
Gp0015809  
Project Name
Aminobacterium mobile DSM 12262  
Other Names
  
Legacy ER Project ID
21310  
Legacy GOLD ID
Gi13990  
NCBI BioProject Name Aminobacterium mobile DSM 12262
NCBI BioProject ID 195827
NCBI BioProject Accession
PRJNA195827  
NCBI Locus Tag
K360  
NCBI BioSample Accession
SAMN02584934  
PI Jonathan Eisen
Added By JGI automated process on 2012-01-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
This organism is part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) initiative to sequence genomes that fill phylogenetic gaps.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Aminobacterium mobile DSM 12262
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular Fragment, 270bp; Illumina Regular LMP, 8kb, CLRS; Illumina Regular LMP, 4kb, CLRS  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0015809
Organism Name
Aminobacterium mobile DSM 12262  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SYNERGISTETES  
Genus
Aminobacterium  
Genus Synonyms
  
Species
Aminobacterium mobile  
Subspecies
  
Species Synonyms
  
Strain
DSM 12262  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12262  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4471  
Exemplar Name
Aminobacterium mobile  
Taxon DOI
10.1601/tx.4471  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1304875
NCBI Kingdom
  
NCBI Phylum
Synergistetes  
NCBI Class
Synergistia  
NCBI Order
Synergistales  
NCBI Family
Synergistaceae  
NCBI Genus
Aminobacterium  
NCBI Species
Aminobacterium mobile  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF073521
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Curved-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
7.4  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sludge
Wastewater treatment plant
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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