PROJECT NAME
GOLD Project ID
Gp0015803  
Project Name
Allobaculum stercoricanis DSM 13633  
Other Names
  
Legacy ER Project ID
21304  
Legacy GOLD ID
Gi13988  
NCBI BioProject Name Allobaculum stercoricanis DSM 13633
NCBI BioProject ID 160105
NCBI BioProject Accession
PRJNA160105  
NCBI Locus Tag
Allst  
NCBI BioSample Accession
SAMN02261259  
PI Jonathan Eisen
Added By JGI automated process on 2012-01-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Allobaculum stercoricanis DSM 13633 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Allobaculum stercoricanis DSM 13633
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Unknown
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0025835
Organism Name
Allobaculum stercoricanis DSM 13633  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Allobaculum  
Genus Synonyms
  
Species
Allobaculum stercoricanis  
Subspecies
  
Species Synonyms
  
Strain
DSM 13633  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 13633  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10187  
Exemplar Name
Allobaculum stercoricanis  
Taxon DOI
10.1601/tx.10187  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1050201
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Erysipelotrichia  
NCBI Order
Erysipelotrichales  
NCBI Family
Erysipelotrichaceae  
NCBI Genus
Allobaculum  
NCBI Species
Allobaculum stercoricanis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Fecal  
Specific Ecosystem
Uncharacterized  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ417075
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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