PROJECT INFORMATION
GOLD Project ID
Gp0015350  
Project Name
Rhodothermus marinus SG0.5JP17-172  
Other Names
  
Legacy ER Project ID
22077  
Legacy GOLD ID
Gi08211, Gc0022077  
NCBI BioProject Name Rhodothermus marinus SG0.5JP17-172
NCBI BioProject ID 56095
NCBI BioProject Accession PRJNA56095
NCBI Locus Tag
Rhom172  
NCBI BioSample Accession SAMN02261379
PI John Gladden
Added By JGI automated process on 2012-01-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute DOE Joint Bioenergy Institute (JBEI) (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Rhodothermus marinus SG0.5JP17-172 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Compost Feedstock-Adapted Isolates
Analysis Projects Rhodothermus marinus SG0.5JP17-172
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
454 GS FLX Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0015350
Organism Name
Rhodothermus marinus SG0.5JP17-172  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Rhodothermus  
Genus Synonyms
  
Species
Rhodothermus marinus  
Subspecies
  
Species Synonyms
  
Strain
SG0.5JP17-172  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 762570
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
  
NCBI Order
Bacteroidetes Order II. Incertae sedis  
NCBI Family
Rhodothermaceae  
NCBI Genus
Rhodothermus  
NCBI Species
Rhodothermus marinus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Red  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?