PROJECT NAME
GOLD Project ID
Gp0015085  
Project Name
Thermonema rossianum DSM 10300  
Other Names
  
Legacy ER Project ID
22616  
Legacy GOLD ID
Gi13796  
NCBI BioProject Name Thermonema rossianum DSM 10300
NCBI BioProject ID 195851
NCBI BioProject Accession
PRJNA195851  
NCBI Locus Tag
K384  
NCBI BioSample Accession
SAMN02440846  
PI Jonathan Eisen
Added By JGI automated process on 2012-01-27 00:00:00.0
Last Modified By Auto script update processes on 2014-08-18 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Thermonema rossianum DSM 10300
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular LMP, 8kb, CLRS; Illumina Regular Fragment, 270bp  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
49  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0015085
Organism Name
Thermonema rossianum DSM 10300  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Thermonema  
Genus Synonyms
  
Species
Thermonema rossianum  
Subspecies
  
Species Synonyms
  
Strain
DSM 10300  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 10300  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8330  
Exemplar Name
Thermonema rossianum  
Taxon DOI
10.1601/tx.8330  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1313301
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Thermonemataceae  
NCBI Genus
Thermonema  
NCBI Species
Thermonema rossianum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
60  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Yellow  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Hot spring
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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