PROJECT INFORMATION
GOLD Project ID
Gp0014894  
Project Name
Succinispira mobilis DSM 6222  
Other Names
  
Legacy ER Project ID
22565  
Legacy GOLD ID
Gi13993  
NCBI BioProject Name Succinispira mobilis DSM 6222
NCBI BioProject Accession PRJNA88129
NCBI Locus Tag
Sucmo  
NCBI BioSample Accession SAMN02261323
Source Sample ID
PI Jonathan Eisen
Added By JGI automated process on 2012-01-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Succinispira mobilis DSM 6222 Genome sequencing  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI 10.46936/10.25585/60007347
JGI Portal Download Raw Sequence Data
Genome Publications Nature biotechnology: 35(7):676-683 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.
PubMed: 28604660 DOI: 10.1038/nbt.3886
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Organism Succinispira mobilis DSM 6222
Analysis Projects Succinispira mobilis DSM 6222
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014894
Organism Name
Succinispira mobilis DSM 6222  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACILLOTA  
Genus
Succinispira  
Genus Synonyms
  
Species
Succinispira mobilis  
Subspecies
  
Species Synonyms
  
Strain
DSM 6222  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 6222  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4444  
Exemplar Name
Succinispira mobilis  
Taxon DOI
10.1601/tx.4444  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1069080
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacillota  
NCBI Class
Negativicutes  
NCBI Order
Acidaminococcales  
NCBI Family
Acidaminococcaceae  
NCBI Genus
Succinispira  
NCBI Species
Succinispira mobilis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Pond  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ006980
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
0.5 um  
Cell Length
2 - 10 um  
Color
White  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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