PROJECT NAME
GOLD Project ID
Gp0014145  
Project Name
Thermus oshimai DSM 12092  
Other Names
  
Legacy ER Project ID
21171  
Legacy GOLD ID
Gi12023  
NCBI BioProject Name Thermus oshimai DSM 12092
NCBI BioProject ID 169715
NCBI BioProject Accession
PRJNA169715  
NCBI Locus Tag
B043  
NCBI BioSample Accession
SAMN02441370  
PI Nikos Kyrpides
Added By JGI automated process on 2012-01-11
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA-KMG
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Analysis Projects Thermus oshimai DSM 12092
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014145
Organism Name
Thermus oshimai DSM 12092  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Thermus  
Genus Synonyms
  
Species
Thermus oshimai  
Subspecies
  
Species Synonyms
  
Strain
DSM 12092  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12092  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.526  
Exemplar Name
Thermus oshimai  
Taxon DOI
10.1601/tx.526  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1123390
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Thermales  
NCBI Family
Thermaceae  
NCBI Genus
Thermus  
NCBI Species
Thermus oshimai  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 304130
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
70 C  
Salinity
  
pH
7-8  
Cell Diameter
  
Cell Length
  
Color
Yellow  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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