PROJECT NAME
GOLD Project ID
Gp0013900  
Project Name
Desulfotomaculum thermocisternum DSM 10259  
Other Names
  
Legacy ER Project ID
20555  
Legacy GOLD ID
Gi11407  
NCBI BioProject Name Desulfotomaculum thermocisternum DSM 10259
NCBI BioProject ID 234877
NCBI BioProject Accession
PRJNA234877  
NCBI Locus Tag
BR83  
NCBI BioSample Accession
SAMN02743376  
PI Nikos Kyrpides
Added By JGI automated process on 2012-01-11
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA-KMG
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Analysis Projects Desulfotomaculum thermocisternum DSM 10259
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Illumina HiSeq 2000
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular Fragment, 270bp  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013900
Organism Name
Desulfotomaculum thermocisternum DSM 10259  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfotomaculum  
Genus Synonyms
  
Species
Desulfotomaculum thermocisternum  
Subspecies
  
Species Synonyms
  
Strain
DSM 10259  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 10259  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4350  
Exemplar Name
Desulfotomaculum thermocisternum  
Taxon DOI
10.1601/tx.4350  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121430
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulfotomaculum  
NCBI Species
Desulfotomaculum thermocisternum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Oil reservoir  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 161923
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
62 C  
Salinity
  
pH
6.2-8.9  
Cell Diameter
0.7-1.0 um  
Cell Length
2.0-5.2 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases
  
Known Habitats Aquatic
Oil fields
Metabolisms Sulfate reducer
Phenotypes
  
Energy Sources
  

 

 

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