PROJECT NAME
GOLD Project ID
Gp0013736  
Project Name
Actinoplanes sp. SE50/110  
Other Names
  
Legacy ER Project ID
6214  
Legacy GOLD ID
Gc02047  
NCBI BioProject Name Actinoplanes sp. SE50/110
NCBI BioProject ID 76835
NCBI BioProject Accession
PRJNA76835  
NCBI Locus Tag
ACPL  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2011-12-13
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center
  
Collaborating Institute Bielefeld University (Germany)
Funding Agency
  
Project Description
Actinoplanes sp. SE50/110 is known as the wild type producer of the ?-glucosidase inhibitor acarbose, a potent drug used worldwide in the treatment of type-2 diabetes mellitus.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 13(112):112 The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Actinoplanes sp. SE50/110
Analysis Projects Actinoplanes sp. SE50/110
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
71  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0013736
Organism Name
Actinoplanes sp. SE50/110  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Actinoplanes  
Genus Synonyms
  
Species
Actinoplanes sp. SE50/110  
Subspecies
  
Species Synonyms
  
Strain
SE50/110  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 31044  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 134676
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Micromonosporales  
NCBI Family
Micromonosporaceae  
NCBI Genus
Actinoplanes  
NCBI Species
Actinoplanes sp. SE50/110  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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