PROJECT INFORMATION
GOLD Project ID
Gp0012817  
Project Name
Teredinibacter turnerae T8415  
Other Names
  
Legacy ER Project ID
6068  
Legacy GOLD ID
Gi17153  
NCBI BioProject Name Teredinibacter turnerae T8415
NCBI BioProject Accession PRJNA82181
NCBI Locus Tag
Tertur  
NCBI BioSample Accession SAMN02440596
Source Sample ID
PI Dan Distel
Added By TBK Reddy on 2011-11-16
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Biofuels
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Maine
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
A comparative genomic and metagenomic analysis of lignocellulose-degrading microbial communities from multiple species of wood-boring bivalves.  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI 10.46936/10.25585/60001419
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Marine microbial communities from multiple species of wood-boring bivalves (shipworm isolates)
Organism Teredinibacter turnerae T8415
Analysis Projects Teredinibacter turnerae T8415
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Illumina HiSeq 2000
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012817
Organism Name
Teredinibacter turnerae T8415  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Teredinibacter  
Genus Synonyms
  
Species
Teredinibacter turnerae  
Subspecies
  
Species Synonyms
  
Strain
T8415  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1056818
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Pseudomonadota  
NCBI Class
Gammaproteobacteria  
NCBI Order
Cellvibrionales  
NCBI Family
Cellvibrionaceae  
NCBI Genus
Teredinibacter  
NCBI Species
Teredinibacter turnerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Gills  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lyrodus pedicellatus  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Endosymbiont
Metabolisms Cellulose degrader
Dinitrogen-fixing
Phenotypes
  
Energy Sources Chemoheterotroph

 

 

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