PROJECT NAME
GOLD Project ID
Gp0012543  
Project Name
Alicyclobacillus acidocaldarius acidocaldarius Tc-4-1  
Other Names
  
Legacy ER Project ID
19943  
Legacy GOLD ID
Gc01967  
NCBI BioProject Name Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
NCBI BioProject ID 68273
NCBI BioProject Accession
PRJNA68273  
NCBI Locus Tag
TC41  
NCBI BioSample Accession
  
PI Songnian Hu
Added By Nikos Kyrpides on 2011-09-16
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
This organism is both thermophilic and acidophilic and produces heat and acid stable enzymes, such as amylase and esterase, which may be important in industry.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Journal of bacteriology 193(19):5602-3 Complete genome sequence of Alicyclobacillus acidocaldarius strain Tc-4-1.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Alicyclobacillus acidocaldarius acidocaldarius Tc-4-1
Analysis Projects Alicyclobacillus acidocaldarius acidocaldarius Tc-4-1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0012543
Organism Name
Alicyclobacillus acidocaldarius acidocaldarius Tc-4-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Alicyclobacillus  
Genus Synonyms
  
Species
Alicyclobacillus acidocaldarius  
Subspecies
acidocaldarius  
Species Synonyms
  
Strain
Tc-4-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1048834
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Alicyclobacillaceae  
NCBI Genus
Alicyclobacillus  
NCBI Species
Alicyclobacillus acidocaldarius  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes Acidophile
Energy Sources
  

 

 

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