PROJECT NAME
GOLD Project ID
Gp0012108  
Project Name
Lactobacillus malefermentans KCTC 3548  
Other Names
  
Legacy ER Project ID
5318  
Legacy GOLD ID
Gi10188  
NCBI BioProject Name Lactobacillus malefermentans KCTC 3548
NCBI BioProject ID 68081
NCBI BioProject Accession
PRJDA68081  
NCBI Locus Tag
GSG  
NCBI BioSample Accession
  
PI Hong-Seog Park
Added By JGI automated process on 2011-07-14
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Korea Research Institute of Bioscience and Biotechnology (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Lactobacillus malefermentans KCTC 3548 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(19):5537 Draft genome sequence of Lactobacillus malefermentans KCTC 3548.
Other Publications
  
PROJECT COMPOSITION
Studies Lactobacillus malefermentans KCTC 3548
Analysis Projects Lactobacillus malefermentans KCTC 3548
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012108
Organism Name
Lactobacillus malefermentans KCTC 3548  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus malefermentans  
Subspecies
  
Species Synonyms
  
Strain
KCTC 3548  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KCTC 3548  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5397  
Exemplar Name
Lactobacillus malefermentans  
Taxon DOI
10.1601/tx.5397  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1046594
NCBI Kingdom
Bacteria  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus malefermentans  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Fermented beverages  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 888
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
25-34 C  
Salinity
  
pH
4.3  
Cell Diameter
  
Cell Length
2-6 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Metabolisms
  
Phenotypes Catalase negative
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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