PROJECT NAME
GOLD Project ID
Gp0010971  
Project Name
Acidovorax radicis N35  
Other Names
  
Legacy ER Project ID
19532  
Legacy GOLD ID
Gi09536  
NCBI BioProject Name Acidovorax radicis N35
NCBI BioProject ID 64465
NCBI BioProject Accession
PRJNA64465  
NCBI Locus Tag
ARADN35  
NCBI BioSample Accession
SAMN02469888  
PI
Added By Ioanna Pagani on 2011-04-13 00:00:00.0
Last Modified By Auto script update processes on 2014-08-18 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Helmholtz Centre for Infection Research (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Acidovorax radicis sp. nov. strain N35T(DSM 23535T) was isolated from surface sterilized wheat roots and is a Gram-negative, aerobic and motile straight rod. Strain N35 showed irreversible phenotypic variation when grown in NB medium, resulting in a differing colony morphology.   
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Acidovorax radicis N35
Analysis Projects Acidovorax radicis N35
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010971
Organism Name
Acidovorax radicis N35  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Acidovorax  
Genus Synonyms
  
Species
Acidovorax radicis  
Subspecies
  
Species Synonyms
  
Strain
N35, DSM 23535  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 23535  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22659  
Exemplar Name
Acidovorax radicis  
Taxon DOI
10.1601/tx.22659  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 999386
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Comamonadaceae  
NCBI Genus
Acidovorax  
NCBI Species
Acidovorax radicis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizosphere  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bacterial fruit blotch
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?