PROJECT INFORMATION
GOLD Project ID
Gp0010669  
Project Name
Lactobacillus casei BD-II  
Other Names
  
Legacy ER Project ID
19461  
Legacy GOLD ID
Gc01709  
NCBI BioProject Name Lactobacillus casei BD-II
NCBI BioProject ID 64431
NCBI BioProject Accession PRJNA64431
NCBI Locus Tag
LCBD  
NCBI BioSample Accession SAMN02603876
PI Benheng Guo
Added By Nikos Kyrpides on 2011-04-01
Last Modified By Alejandro Rodriguez Mojica on 2018-08-02
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Tianjin Biochip (China)
Collaborating Institute
  
Funding Agency
  
Project Description
This strain has the potential probiotic properties such as reduce the blood lipid level and regulate the cardiovascular system  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(12):3160-1 Complete genome sequence of the probiotic strain Lactobacillus casei BD-II.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus casei BD-II
Analysis Projects Lactobacillus casei BD-II
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
46  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0010669
Organism Name
Lactobacillus casei BD-II  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus casei  
Subspecies
  
Species Synonyms
  
Strain
BD-II  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 998820
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus casei  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30 - 40  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Food
Metabolisms
  
Phenotypes Probiotic
Energy Sources Heterotroph

 

 

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