PROJECT NAME
GOLD Project ID
Gp0010622  
Project Name
Vibrio ordalii Schiewe DF3K, ATCC 33509  
Other Names
  
Legacy ER Project ID
19139  
Legacy GOLD ID
Gi09129  
NCBI BioProject Name Vibrio ordalii ATCC 33509
NCBI BioProject ID 63225
NCBI BioProject Accession
PRJNA63225  
NCBI Locus Tag
VOR  
NCBI BioSample Accession
SAMN02470772  
PI Crosa, J
Added By Ioanna Pagani on 2011-03-02
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Fish Pathogen
Food industry
Sequencing Center
  
Collaborating Institute ANRT (France)
Funding Agency
  
Project Description
Causes vibriosis in cage-farmed Atlantic salmon, with symptoms such as haemorrhage in the mouth, fin basis, internal organs and muscle walls, gill damage, and increase in spleen,   
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Infection and immunity 79(7):2889-900 Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Vibrio ordalii Schiewe DF3K, ATCC 33509
Analysis Projects Vibrio ordalii Schiewe DF3K, ATCC 33509
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010622
Organism Name
Vibrio ordalii Schiewe DF3K, ATCC 33509  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio ordalii  
Subspecies
  
Species Synonyms
  
Strain
Schiewe DF3K, ATCC 33509  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 33509  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2991  
Exemplar Name
Vibrio ordalii  
Taxon DOI
10.1601/tx.2991  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 990998
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio ordalii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
26-30C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Vibriosis
Known Habitats Fresh water
Host
Mud
Sea water
Soil
Metabolisms Hydrogen sulfide gas release
Sulfate reducer
Phenotypes
  
Energy Sources
  

 

 

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