PROJECT NAME
GOLD Project ID
Gp0009521  
Project Name
Yokenella regensburgei F. Haas DC-1, ATCC 49455  
Other Names
  
Legacy ER Project ID
18216  
Legacy GOLD ID
Gi08263  
NCBI BioProject Name Yokenella regensburgei ATCC 49455
NCBI BioProject ID 59563
NCBI BioProject Accession
PRJNA59563  
NCBI Locus Tag
GYRE  
NCBI BioSample Accession
SAMN02743390  
PI
Added By Ioanna Pagani on 2010-11-02
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center University of Wisconsin, Madison (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Yokenella regensburgei ATCC 49455 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Univ of Wisconsin
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Yokenella regensburgei F. Haas DC-1, ATCC 49455
Analysis Projects Yokenella regensburgei F. Haas DC-1, ATCC 49455
Yokenella regensburgei F. Haas DC-1, ATCC 49455
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0009521
Organism Name
Yokenella regensburgei F. Haas DC-1, ATCC 49455  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Yokenella  
Genus Synonyms
  
Species
Yokenella regensburgei  
Subspecies
  
Species Synonyms
  
Strain
F. Haas DC-1, ATCC 49455  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49455  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3368  
Exemplar Name
Yokenella regensburgei  
Taxon DOI
10.1601/tx.3368  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 911023
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Yokenella  
NCBI Species
Yokenella regensburgei  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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